Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | PviCFBP13507_26155 | Not Available | Negative | 5755893 - 5756261 | 14082.8 |
| carbon starvation protein a | PviCFBP13507_26160 | Not Available | Positive | 5756545 - 5758620 | 74191.9 |
| duf466 domain-containing protein | PviCFBP13507_26165 | Not Available | Positive | 5758648 - 5758845 | 7584.14 |
| gtpase | PviCFBP13507_26170 | Not Available | Positive | 5758940 - 5759917 | 35802.3 |
| ydcf family protein | PviCFBP13507_26175 | Not Available | Negative | 5759945 - 5760514 | 20612.9 |
| serine hydroxymethyltransferase | PviCFBP13507_26180 | Not Available | Negative | 5760618 - 5761871 | 44830.5 |
| diguanylate phosphodiesterase | PviCFBP13507_26185 | Not Available | Negative | 5762113 - 5765949 | 144311.0 |
| abc transporter atp-binding protein | PviCFBP13507_26190 | Not Available | Negative | 5767072 - 5768904 | 67583.3 |
| peptidylprolyl isomerase a | PviCFBP13507_26195 | Not Available | Negative | 5769005 - 5769568 | 20198.3 |
| 3-oxoadipate enol-lactonase | PviCFBP13507_26200 | Not Available | Negative | 5769706 - 5770494 | 29700.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
