Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase family protein subunit m | PviCFBP13507_26105 | Not Available | Positive | 5744665 - 5745654 | 35314.2 |
| aldehyde oxidase | PviCFBP13507_26110 | Not Available | Positive | 5745651 - 5747852 | 79169.3 |
| cytochrome ubiquinol oxidase subunit i | PviCFBP13507_26115 | Not Available | Positive | 5748285 - 5749724 | 53428.6 |
| cytochrome d ubiquinol oxidase subunit ii | PviCFBP13507_26120 | Not Available | Positive | 5749728 - 5750735 | 37041.4 |
| duf2474 domain-containing protein | PviCFBP13507_26125 | Not Available | Positive | 5750757 - 5750924 | 6001.46 |
| class i sam-dependent methyltransferase | PviCFBP13507_26130 | Not Available | Negative | 5751020 - 5752144 | 40686.1 |
| luxr family transcriptional regulator | PviCFBP13507_26135 | Not Available | Negative | 5752277 - 5752510 | 8347.32 |
| ferredoxin--nadp reductase | PviCFBP13507_26140 | Not Available | Positive | 5752852 - 5753628 | 29496.4 |
| large-conductance mechanosensitive channel protein mscl | PviCFBP13507_26145 | Not Available | Negative | 5753880 - 5754326 | 15617.5 |
| dna repair protein rada | PviCFBP13507_26150 | Not Available | Positive | 5754519 - 5755886 | 48936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
