Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_02415 | Not Available | Positive | 585752 - 586681 | 33856.0 |
| aromatic alcohol reductase | PviCFBP13507_02425 | Not Available | Positive | 587216 - 588175 | 34471.4 |
| had family hydrolase | PviCFBP13507_02430 | Not Available | Positive | 588287 - 588973 | 24842.8 |
| hypothetical protein | PviCFBP13507_02440 | Not Available | Positive | 589263 - 589463 | 7111.55 |
| arac family transcriptional regulator | PviCFBP13507_02445 | Not Available | Negative | 589506 - 590405 | 32883.0 |
| kr domain-containing protein | PviCFBP13507_02450 | Not Available | Positive | 590550 - 591308 | 26604.8 |
| glutathione s-transferase family protein | PviCFBP13507_02455 | Not Available | Positive | 591352 - 592047 | 25845.0 |
| arac family transcriptional regulator | PviCFBP13507_02470 | Not Available | Negative | 593360 - 594325 | 35427.7 |
| hypothetical protein | PviCFBP13507_02475 | Not Available | Positive | 594678 - 595280 | 22799.0 |
| methyl-accepting chemotaxis protein | PviCFBP13507_02480 | Not Available | Positive | 595352 - 596971 | 58234.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
