Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | PviCFBP13507_26000 | Not Available | Negative | 5722341 - 5723234 | 33804.8 |
| atp-dependent zinc protease | PviCFBP13507_26005 | Not Available | Positive | 5723427 - 5723930 | 18756.5 |
| two-component system response regulator creb | PviCFBP13507_26010 | Not Available | Positive | 5723990 - 5724670 | 25212.2 |
| two-component system sensor histidine kinase crec | PviCFBP13507_26015 | Not Available | Positive | 5724670 - 5726097 | 52785.5 |
| hypothetical protein | PviCFBP13507_26020 | Not Available | Negative | 5726133 - 5727119 | 36462.2 |
| cell envelope integrity protein cred | PviCFBP13507_26025 | Not Available | Positive | 5727412 - 5728788 | 50873.8 |
| glutathione s-transferase family protein | PviCFBP13507_26030 | Not Available | Negative | 5728905 - 5729519 | 22940.3 |
| hypothetical protein | PviCFBP13507_26035 | Not Available | Negative | 5729648 - 5729827 | 6313.82 |
| peptidase | PviCFBP13507_26040 | Not Available | Negative | 5729824 - 5730957 | 41444.6 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_26045 | Not Available | Negative | 5731057 - 5732040 | 36000.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
