Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_25790 | Not Available | Negative | 5666602 - 5667366 | 26495.8 |
| lysr family transcriptional regulator | PviCFBP13507_25795 | Not Available | Positive | 5667466 - 5668347 | 32045.7 |
| trna 2-selenouridine(34) synthase mnmh | PviCFBP13507_25800 | Not Available | Negative | 5668509 - 5669615 | 41633.7 |
| selenide, water dikinase seld | PviCFBP13507_25805 | Not Available | Negative | 5669615 - 5670649 | 36140.6 |
| putative selenate abc transporter substrate-binding protein | PviCFBP13507_25810 | Not Available | Positive | 5670884 - 5671735 | 30828.0 |
| phosphonate abc transporter | PviCFBP13507_25815 | Not Available | Positive | 5671732 - 5672532 | 28615.9 |
| abc transporter permease | PviCFBP13507_25820 | Not Available | Positive | 5672526 - 5673353 | 29222.4 |
| phosphonate abc transporter, permease protein phne | PviCFBP13507_25825 | Not Available | Positive | 5673350 - 5674117 | 27136.8 |
| gamma-glutamyltransferase | PviCFBP13507_25830 | Not Available | Negative | 5674359 - 5676086 | 61244.2 |
| dna-binding response regulator | PviCFBP13507_25835 | Not Available | Positive | 5676350 - 5677114 | 28585.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
