Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neutral zinc metallopeptidase | PviCFBP13507_25740 | Not Available | Positive | 5657467 - 5658357 | 31954.5 |
| hypothetical protein | PviCFBP13507_25745 | Not Available | Positive | 5658362 - 5659351 | 36782.2 |
| had family hydrolase | PviCFBP13507_25750 | Not Available | Negative | 5659768 - 5660322 | 19893.0 |
| acyl-coa thioesterase ii | PviCFBP13507_25755 | Not Available | Negative | 5660355 - 5661224 | 32718.6 |
| n-acetyltransferase | PviCFBP13507_25760 | Not Available | Negative | 5661348 - 5661917 | 21363.8 |
| histone deacetylase | PviCFBP13507_25765 | Not Available | Positive | 5662036 - 5662953 | 34083.6 |
| aminoacetone oxidase family fad-binding enzyme | PviCFBP13507_25770 | Not Available | Positive | 5663017 - 5664258 | 44502.8 |
| lysr family transcriptional regulator | PviCFBP13507_25775 | Not Available | Negative | 5664308 - 5665204 | 33380.0 |
| nadph quinone reductase mdab | PviCFBP13507_25780 | Not Available | Negative | 5665536 - 5666120 | 21786.7 |
| antibiotic biosynthesis monooxygenase | PviCFBP13507_25785 | Not Available | Positive | 5666313 - 5666648 | 12706.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
