Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 5641993 - 5642069 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5642157 - 5642233 | Not Available |
| outer membrane protein assembly factor bame | PviCFBP13507_25700 | Not Available | Negative | 5642277 - 5642771 | 18444.9 |
| magnesium transporter | PviCFBP13507_25705 | Not Available | Positive | 5643096 - 5644538 | 53487.0 |
| arc family dna-binding protein | PviCFBP13507_25710 | Not Available | Negative | 5644686 - 5645012 | 12380.7 |
| hypothetical protein | PviCFBP13507_25715 | Not Available | Negative | 5645505 - 5645690 | 6435.28 |
| hypothetical protein | PviCFBP13507_25720 | Not Available | Negative | 5645729 - 5645971 | 8808.48 |
| Trna-arg | Not Available | Not Available | Positive | 5646287 - 5646363 | Not Available |
| hypothetical protein | PviCFBP13507_25730 | Not Available | Positive | 5647247 - 5654821 | 282556.0 |
| mfs transporter | PviCFBP13507_25735 | Not Available | Positive | 5655988 - 5657274 | 45463.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
