Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | PviCFBP13507_25585 | Not Available | Negative | 5623786 - 5625141 | 50594.5 |
| ltxxq domain-containing protein | PviCFBP13507_25590 | Not Available | Negative | 5625232 - 5625702 | 17811.4 |
| dna-binding response regulator | PviCFBP13507_25595 | Not Available | Negative | 5625823 - 5626500 | 25025.2 |
| translation initiation factor 2 | PviCFBP13507_25600 | Not Available | Negative | 5626508 - 5626915 | 15048.1 |
| hypothetical protein | PviCFBP13507_25605 | Not Available | Negative | 5627070 - 5627369 | 10447.5 |
| septation protein a | PviCFBP13507_25610 | Not Available | Negative | 5627371 - 5627967 | 22493.9 |
| php domain-containing protein | PviCFBP13507_25615 | Not Available | Positive | 5628033 - 5628896 | 31109.0 |
| threonylcarbamoyl-amp synthase | PviCFBP13507_25620 | Not Available | Positive | 5628910 - 5629539 | 22846.8 |
| segregation/condensation protein a | PviCFBP13507_25625 | Not Available | Positive | 5629539 - 5630357 | 30645.4 |
| smc-scp complex subunit scpb | PviCFBP13507_25630 | Not Available | Positive | 5630373 - 5631158 | 29777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
