Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PviCFBP13507_25535 | Not Available | Negative | 5612582 - 5615356 | 103219.0 |
| arac family transcriptional regulator | PviCFBP13507_25540 | Not Available | Negative | 5615419 - 5615856 | 16255.2 |
| mechanosensitive ion channel protein mscs | PviCFBP13507_25545 | Not Available | Negative | 5616017 - 5617444 | 51049.2 |
| lysr family transcriptional regulator | PviCFBP13507_25550 | Not Available | Positive | 5617562 - 5618470 | 33706.5 |
| selt/selw/selh family protein | PviCFBP13507_25555 | Not Available | Positive | 5618778 - 5619080 | 11183.3 |
| eama family transporter | PviCFBP13507_25560 | Not Available | Negative | 5619074 - 5619949 | 30423.2 |
| udp-2,3-diacylglucosamine diphosphatase | PviCFBP13507_25565 | Not Available | Positive | 5620083 - 5620910 | 31613.8 |
| duf962 domain-containing protein | PviCFBP13507_25570 | Not Available | Negative | 5620917 - 5621228 | 12068.7 |
| trkh family potassium uptake protein | PviCFBP13507_25575 | Not Available | Negative | 5621590 - 5623044 | 53000.1 |
| nitroreductase | PviCFBP13507_25580 | Not Available | Positive | 5623219 - 5623779 | 19951.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
