Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2238 domain-containing protein | PviCFBP13507_02360 | Not Available | Negative | 572701 - 573240 | 19775.0 |
| hypothetical protein | PviCFBP13507_02365 | Not Available | Positive | 573929 - 575086 | 41349.4 |
| energy transducer tonb | PviCFBP13507_02375 | Not Available | Positive | 576778 - 577482 | 24241.7 |
| mota/tolq/exbb proton channel family protein | PviCFBP13507_02380 | Not Available | Positive | 577492 - 578178 | 24596.7 |
| biopolymer transporter exbd | PviCFBP13507_02385 | Not Available | Positive | 578180 - 578584 | 14235.1 |
| ligand-gated channel | PviCFBP13507_02390 | Not Available | Positive | 578655 - 580955 | 83229.4 |
| hypothetical protein | PviCFBP13507_02395 | Not Available | Negative | 581037 - 581774 | 26655.4 |
| d-amino-acid oxidase | PviCFBP13507_02400 | Not Available | Positive | 582085 - 583410 | 47047.1 |
| outer membrane porin, oprd family | PviCFBP13507_02405 | Not Available | Negative | 583495 - 584790 | 46489.5 |
| nad(p)h dehydrogenase | PviCFBP13507_02410 | Not Available | Negative | 584870 - 585667 | 29824.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
