Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii glutamate--ammonia ligase | PviCFBP13507_00080 | Not Available | Positive | 15481 - 16815 | 49091.6 |
| amidophosphoribosyltransferase | PviCFBP13507_00085 | Not Available | Positive | 16889 - 17794 | 32950.3 |
| protein glxc | PviCFBP13507_00090 | Not Available | Positive | 17806 - 18489 | 24063.6 |
| fmn-binding glutamate synthase family protein | PviCFBP13507_00095 | Not Available | Positive | 18505 - 19842 | 47374.1 |
| ammonia channel protein | PviCFBP13507_00100 | Not Available | Positive | 20470 - 21795 | 45981.2 |
| llm class flavin-dependent oxidoreductase | PviCFBP13507_00105 | Not Available | Negative | 22071 - 23108 | 38818.6 |
| flavin reductase | PviCFBP13507_00110 | Not Available | Negative | 23187 - 23672 | 17508.0 |
| hypothetical protein | PviCFBP13507_00115 | Not Available | Negative | 23864 - 24199 | 12049.6 |
| deda family protein | PviCFBP13507_00120 | Not Available | Negative | 24355 - 24795 | 16135.3 |
| dimethyl sulfone monooxygenase sfng | PviCFBP13507_00125 | Not Available | Positive | 25065 - 26171 | 40635.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
