Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PviCFBP13507_25435 | Not Available | Negative | 5594840 - 5595709 | 30285.8 |
| abc transporter substrate-binding protein | PviCFBP13507_25440 | Not Available | Negative | 5595709 - 5596710 | 35917.0 |
| gntr family transcriptional regulator | PviCFBP13507_25445 | Not Available | Negative | 5596694 - 5597713 | 36941.5 |
| serine/threonine protein kinase | PviCFBP13507_25450 | Not Available | Positive | 5597910 - 5598884 | 37094.2 |
| protease htpx | PviCFBP13507_25455 | Not Available | Negative | 5599390 - 5600277 | 32386.8 |
| pyridoxal phosphate-dependent aminotransferase | PviCFBP13507_25460 | Not Available | Negative | 5600544 - 5601755 | 44820.1 |
| peptide-methionine (r)-s-oxide reductase | PviCFBP13507_25465 | Not Available | Positive | 5601947 - 5602342 | 14714.4 |
| glutathione peroxidase | PviCFBP13507_25470 | Not Available | Positive | 5602471 - 5602956 | 17791.6 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_25475 | Not Available | Negative | 5602953 - 5605316 | 87060.9 |
| duf815 domain-containing protein | PviCFBP13507_25480 | Not Available | Positive | 5605406 - 5606296 | 33652.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
