Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | PviCFBP13507_25385 | Not Available | Negative | 5584327 - 5585136 | 29453.1 |
| transporter | PviCFBP13507_25390 | Not Available | Negative | 5585129 - 5585872 | 26479.4 |
| 8-amino-7-oxononanoate synthase | PviCFBP13507_25395 | Not Available | Negative | 5585865 - 5587055 | 42861.6 |
| biotin synthase biob | PviCFBP13507_25400 | Not Available | Negative | 5587076 - 5588134 | 38540.3 |
| comf family protein | PviCFBP13507_25405 | Not Available | Positive | 5588226 - 5588966 | 27926.2 |
| molybdenum-dependent transcriptional regulator | PviCFBP13507_25410 | Not Available | Positive | 5589185 - 5589949 | 27698.2 |
| transcriptional initiation protein tat | PviCFBP13507_25415 | Not Available | Positive | 5590030 - 5591931 | 69091.9 |
| phosphodiesterase | PviCFBP13507_25420 | Not Available | Negative | 5592162 - 5592995 | 31096.2 |
| abc transporter atp-binding protein | PviCFBP13507_25425 | Not Available | Negative | 5593021 - 5594052 | 37098.0 |
| abc transporter permease | PviCFBP13507_25430 | Not Available | Negative | 5594049 - 5594843 | 28736.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
