Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone biosynthesis protein c | PviCFBP13507_25335 | Not Available | Positive | 5572298 - 5573053 | 29104.4 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | PviCFBP13507_25340 | Not Available | Positive | 5573050 - 5573364 | 12017.3 |
| pyrroloquinoline quinone biosynthesis protein pqqe | PviCFBP13507_25345 | Not Available | Positive | 5573357 - 5574526 | 44013.6 |
| s9 family peptidase | PviCFBP13507_25350 | Not Available | Positive | 5574489 - 5576321 | 66886.8 |
| yqae/pmp3 family membrane protein | PviCFBP13507_25355 | Not Available | Negative | 5576373 - 5576534 | 5898.73 |
| acyl-coa dehydrogenase | PviCFBP13507_25360 | Not Available | Negative | 5577316 - 5579094 | 64264.6 |
| ggdef domain-containing protein | PviCFBP13507_25365 | Not Available | Negative | 5579263 - 5580561 | 48342.9 |
| acyl-coa dehydrogenase | PviCFBP13507_25370 | Not Available | Negative | 5581025 - 5582830 | 65461.5 |
| pyrroloquinoline quinone biosynthesis protein pqqe | PviCFBP13507_25375 | Not Available | Negative | 5583164 - 5583460 | 10429.2 |
| dethiobiotin synthase | PviCFBP13507_25380 | Not Available | Negative | 5583610 - 5584293 | 23672.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
