Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_25285 | Not Available | Positive | 5561942 - 5562823 | 33254.1 |
| hypothetical protein | PviCFBP13507_25290 | Not Available | Positive | 5562893 - 5563795 | 34108.8 |
| hypothetical protein | PviCFBP13507_25295 | Not Available | Negative | 5563952 - 5564173 | 8236.09 |
| hypothetical protein | PviCFBP13507_25300 | Not Available | Positive | 5564087 - 5565154 | 39047.2 |
| lrp/asnc family transcriptional regulator | PviCFBP13507_25305 | Not Available | Positive | 5565246 - 5565707 | 16585.0 |
| nad(p)/fad-dependent oxidoreductase | PviCFBP13507_25310 | Not Available | Positive | 5565860 - 5567539 | 62430.5 |
| carbon-nitrogen hydrolase | PviCFBP13507_25315 | Not Available | Positive | 5567555 - 5568346 | 29091.7 |
| pyrroloquinoline quinone biosynthesis protein pqqf | PviCFBP13507_25320 | Not Available | Positive | 5568720 - 5571086 | 86424.0 |
| pyrroloquinoline quinone precursor peptide pqqa | PviCFBP13507_25325 | Not Available | Positive | 5571210 - 5571284 | 2871.46 |
| pyrroloquinoline quinone biosynthesis protein pqqb | PviCFBP13507_25330 | Not Available | Positive | 5571378 - 5572289 | 33345.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
