Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3100 domain-containing protein | PviCFBP13507_25070 | Not Available | Negative | 5520520 - 5521848 | 46317.9 |
| duf1338 domain-containing protein | PviCFBP13507_25080 | Not Available | Negative | 5522358 - 5523740 | 51385.9 |
| aspartate aminotransferase family protein | PviCFBP13507_25085 | Not Available | Negative | 5523786 - 5525033 | 44507.8 |
| aldehyde dehydrogenase family protein | PviCFBP13507_25090 | Not Available | Positive | 5525281 - 5526771 | 53354.6 |
| fad-dependent oxidoreductase | PviCFBP13507_25095 | Not Available | Positive | 5526796 - 5528082 | 45632.0 |
| two-component sensor histidine kinase | PviCFBP13507_25100 | Not Available | Negative | 5528092 - 5529465 | 50734.0 |
| dna-binding response regulator | PviCFBP13507_25105 | Not Available | Negative | 5529462 - 5530124 | 24794.2 |
| pepsy domain-containing protein | PviCFBP13507_25110 | Not Available | Positive | 5530299 - 5530565 | 9947.04 |
| cytochrome b | PviCFBP13507_25115 | Not Available | Positive | 5530565 - 5531110 | 20580.2 |
| hypothetical protein | PviCFBP13507_25120 | Not Available | Positive | 5531177 - 5532475 | 47416.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
