Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_25020 | Not Available | Negative | 5509326 - 5509550 | 7923.72 |
| glutathione-dependent formaldehyde dehydrogenase | PviCFBP13507_25025 | Not Available | Negative | 5509569 - 5510792 | 43571.3 |
| lysr family transcriptional regulator | PviCFBP13507_25030 | Not Available | Negative | 5511050 - 5511955 | 33275.6 |
| serine acetyltransferase | PviCFBP13507_25035 | Not Available | Positive | 5512061 - 5512825 | 26912.2 |
| voc family protein | PviCFBP13507_25040 | Not Available | Positive | 5512844 - 5513734 | 32553.8 |
| nad(p)-dependent oxidoreductase | PviCFBP13507_25045 | Not Available | Positive | 5513749 - 5514639 | 30287.7 |
| aldehyde dehydrogenase | PviCFBP13507_25050 | Not Available | Positive | 5514643 - 5516160 | 54199.6 |
| amidohydrolase | PviCFBP13507_25055 | Not Available | Positive | 5516166 - 5517323 | 41412.7 |
| l-serine ammonia-lyase | PviCFBP13507_25060 | Not Available | Negative | 5517588 - 5518964 | 49027.9 |
| lysr family transcriptional regulator | PviCFBP13507_25065 | Not Available | Positive | 5519092 - 5519997 | 33907.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
