Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PviCFBP13507_02300 | Not Available | Positive | 559469 - 560764 | 46790.7 |
| lysr family transcriptional regulator | PviCFBP13507_02305 | Not Available | Negative | 560771 - 561661 | 33292.2 |
| agmatinase | PviCFBP13507_02310 | Not Available | Positive | 561876 - 562835 | 34662.8 |
| nitrate reductase | PviCFBP13507_02315 | Not Available | Positive | 563007 - 564533 | 54063.5 |
| xylose isomerase | PviCFBP13507_02320 | Not Available | Positive | 564577 - 565437 | 32488.1 |
| 2og-fe(ii) oxygenase | PviCFBP13507_02325 | Not Available | Positive | 565434 - 566471 | 38447.7 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_02330 | Not Available | Positive | 566504 - 567298 | 28545.2 |
| amino acid abc transporter permease/atp-binding protein | PviCFBP13507_02335 | Not Available | Positive | 567525 - 569042 | 55739.3 |
| hypothetical protein | PviCFBP13507_02340 | Not Available | Positive | 569039 - 570640 | 57468.1 |
| aldehyde dehydrogenase | PviCFBP13507_02345 | Not Available | Positive | 570689 - 572116 | 51083.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
