Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_24970 | Not Available | Positive | 5496445 - 5496741 | 11087.3 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_24975 | Not Available | Negative | 5496720 - 5498807 | 76039.6 |
| lysr family transcriptional regulator | PviCFBP13507_24980 | Not Available | Negative | 5499284 - 5500174 | 33244.4 |
| 4-oxalomesaconate tautomerase | PviCFBP13507_24985 | Not Available | Positive | 5500342 - 5501424 | 37390.1 |
| dicarboxylate/amino acid:cation symporter | PviCFBP13507_24990 | Not Available | Positive | 5501484 - 5502788 | 46342.0 |
| damage-inducible protein cina | PviCFBP13507_24995 | Not Available | Positive | 5502906 - 5504210 | 45907.5 |
| outer membrane porin, oprd family | PviCFBP13507_25000 | Not Available | Positive | 5504290 - 5505546 | 46046.2 |
| nitrate reductase | PviCFBP13507_25005 | Not Available | Negative | 5505617 - 5507068 | 52854.7 |
| gntr family transcriptional regulator | PviCFBP13507_25010 | Not Available | Positive | 5507414 - 5508133 | 26446.6 |
| asp/glu/hydantoin racemase | PviCFBP13507_25015 | Not Available | Positive | 5508144 - 5508875 | 25570.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
