Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_24920 | Not Available | Negative | 5486549 - 5486959 | 14901.4 |
| transcriptional regulator | PviCFBP13507_24925 | Not Available | Positive | 5487050 - 5487451 | 15311.6 |
| sdr family nad(p)-dependent oxidoreductase | PviCFBP13507_24930 | Not Available | Negative | 5487602 - 5488375 | 27234.8 |
| lysr family transcriptional regulator | PviCFBP13507_24935 | Not Available | Positive | 5488482 - 5489411 | 33854.7 |
| cupin domain-containing protein | PviCFBP13507_24940 | Not Available | Positive | 5489486 - 5489989 | 18373.9 |
| tetr family transcriptional regulator | PviCFBP13507_24945 | Not Available | Positive | 5490073 - 5490717 | 24079.3 |
| glycosyl hydrolase family 3 | PviCFBP13507_24950 | Not Available | Negative | 5490778 - 5493468 | 97522.7 |
| hypothetical protein | PviCFBP13507_24955 | Not Available | Negative | 5493526 - 5493777 | 8677.27 |
| arac family transcriptional regulator | PviCFBP13507_24960 | Not Available | Negative | 5494234 - 5495316 | 40641.0 |
| short-chain dehydrogenase/reductase | PviCFBP13507_24965 | Not Available | Positive | 5495591 - 5496397 | 29763.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
