Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_24870 | Not Available | Positive | 5474979 - 5475899 | 34033.9 |
| tetr/acrr family transcriptional regulator | PviCFBP13507_24875 | Not Available | Negative | 5476011 - 5476628 | 23389.7 |
| duf4442 domain-containing protein | PviCFBP13507_24880 | Not Available | Positive | 5476772 - 5477212 | 15509.8 |
| multidrug abc transporter atp-binding protein | PviCFBP13507_24885 | Not Available | Negative | 5477266 - 5479119 | 67552.9 |
| amidase | PviCFBP13507_24890 | Not Available | Negative | 5479573 - 5481279 | 60229.3 |
| deoxyribonuclease i | PviCFBP13507_24895 | Not Available | Negative | 5481335 - 5482312 | 36403.9 |
| arac family transcriptional regulator | PviCFBP13507_24900 | Not Available | Negative | 5482389 - 5483351 | 35237.2 |
| hypothetical protein | PviCFBP13507_24905 | Not Available | Positive | 5483527 - 5483805 | 10347.4 |
| tonb-dependent receptor | PviCFBP13507_24910 | Not Available | Negative | 5483920 - 5485938 | 75546.4 |
| duf2946 domain-containing protein | PviCFBP13507_24915 | Not Available | Negative | 5486060 - 5486458 | 14188.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
