Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3309 domain-containing protein | PviCFBP13507_24820 | Not Available | Negative | 5467505 - 5467663 | 5448.28 |
| duf2784 domain-containing protein | PviCFBP13507_24825 | Not Available | Positive | 5467954 - 5468331 | 13888.5 |
| short chain dehydrogenase | PviCFBP13507_24830 | Not Available | Positive | 5468435 - 5469247 | 29652.9 |
| carbon storage regulator | PviCFBP13507_24835 | Not Available | Positive | 5469421 - 5469618 | 7082.6 |
| yheu family protein | PviCFBP13507_24840 | Not Available | Negative | 5469622 - 5469849 | 8764.46 |
| hydrolase | PviCFBP13507_24845 | Not Available | Negative | 5470478 - 5471104 | 23053.4 |
| duf393 domain-containing protein | PviCFBP13507_24850 | Not Available | Negative | 5471278 - 5471736 | 17189.4 |
| tetr family transcriptional regulator | PviCFBP13507_24855 | Not Available | Negative | 5471883 - 5472482 | 21710.1 |
| alpha/beta hydrolase | PviCFBP13507_24860 | Not Available | Positive | 5472631 - 5473470 | 31068.4 |
| alpha/beta hydrolase | PviCFBP13507_24865 | Not Available | Negative | 5473546 - 5474379 | 29876.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
