Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum site-determining protein mind | PviCFBP13507_24770 | Not Available | Negative | 5456010 - 5456822 | 29381.5 |
| septum site-determining protein minc | PviCFBP13507_24775 | Not Available | Negative | 5457054 - 5457794 | 26389.2 |
| lipid a biosynthesis lauroyl acyltransferase | PviCFBP13507_24780 | Not Available | Positive | 5457915 - 5458847 | 35885.8 |
| patatin | PviCFBP13507_24785 | Not Available | Positive | 5458880 - 5460064 | 42094.8 |
| pirin family protein | PviCFBP13507_24790 | Not Available | Negative | 5460081 - 5460935 | 31691.8 |
| vacj family lipoprotein | PviCFBP13507_24795 | Not Available | Negative | 5461133 - 5461945 | 30463.3 |
| serine/threonine protein kinase | PviCFBP13507_24800 | Not Available | Negative | 5461938 - 5463236 | 48608.0 |
| glycine/betaine abc transporter substrate-binding protein | PviCFBP13507_24805 | Not Available | Positive | 5464356 - 5465210 | 30887.3 |
| duf485 domain-containing protein | PviCFBP13507_24810 | Not Available | Positive | 5465445 - 5465756 | 11394.0 |
| cation acetate symporter | PviCFBP13507_24815 | Not Available | Positive | 5465753 - 5467411 | 58772.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
