Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing protein | PviCFBP13507_24615 | Not Available | Positive | 5424126 - 5424734 | 22840.0 |
| methyl-accepting chemotaxis protein | PviCFBP13507_24620 | Not Available | Negative | 5425014 - 5426651 | 58635.4 |
| capa family protein | PviCFBP13507_24625 | Not Available | Negative | 5426780 - 5428171 | 51492.7 |
| serine hydrolase | PviCFBP13507_24630 | Not Available | Negative | 5428164 - 5429030 | 31809.5 |
| antibiotic hydrolase | PviCFBP13507_24635 | Not Available | Negative | 5429150 - 5431018 | 69392.8 |
| yfcc family protein | PviCFBP13507_24640 | Not Available | Negative | 5431065 - 5432501 | 50193.2 |
| lysr family transcriptional regulator | PviCFBP13507_24645 | Not Available | Negative | 5432781 - 5433680 | 32743.9 |
| outer membrane porin, oprd family | PviCFBP13507_24650 | Not Available | Positive | 5433896 - 5435122 | 44694.0 |
| duf1868 domain-containing protein | PviCFBP13507_24660 | Not Available | Negative | 5435566 - 5436396 | 31178.3 |
| hypothetical protein | PviCFBP13507_24665 | Not Available | Positive | 5436885 - 5437241 | 12516.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
