Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein mota | PviCFBP13507_24565 | Not Available | Negative | 5413085 - 5413786 | 25334.9 |
| tonb family protein | PviCFBP13507_24570 | Not Available | Negative | 5413795 - 5414601 | 28407.1 |
| duf1868 domain-containing protein | PviCFBP13507_24575 | Not Available | Negative | 5414637 - 5415452 | 30687.4 |
| hydratase | PviCFBP13507_24580 | Not Available | Positive | 5416459 - 5417355 | 32478.1 |
| amino acid abc transporter | PviCFBP13507_24585 | Not Available | Positive | 5417393 - 5418556 | 41019.2 |
| branched-chain amino acid abc transporter permease | PviCFBP13507_24590 | Not Available | Positive | 5418615 - 5419448 | 29133.0 |
| branched-chain amino acid abc transporter substrate-binding protein | PviCFBP13507_24595 | Not Available | Positive | 5419441 - 5421249 | 63986.0 |
| abc transporter atp-binding protein | PviCFBP13507_24600 | Not Available | Positive | 5421246 - 5421953 | 25693.6 |
| asparaginase | PviCFBP13507_24605 | Not Available | Positive | 5421959 - 5422960 | 35163.1 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_24610 | Not Available | Positive | 5422970 - 5424121 | 42982.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
