Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_24515 | Not Available | Negative | 5400642 - 5404115 | 127292.0 |
| glycerol acyltransferase | PviCFBP13507_24520 | Not Available | Positive | 5404338 - 5406212 | 69000.5 |
| sodium transporter | PviCFBP13507_24525 | Not Available | Negative | 5406532 - 5407506 | 34725.9 |
| recombination-associated protein rdgc | PviCFBP13507_24530 | Not Available | Negative | 5407591 - 5408511 | 34256.3 |
| Trna-val | Not Available | Not Available | Positive | 5408683 - 5408758 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 5408780 - 5408856 | Not Available |
| hypothetical protein | PviCFBP13507_24545 | Not Available | Positive | 5408909 - 5409154 | 9243.21 |
| laci family transcriptional regulator | PviCFBP13507_24550 | Not Available | Negative | 5409158 - 5410222 | 39071.2 |
| ligand-gated channel | PviCFBP13507_24555 | Not Available | Negative | 5410341 - 5412620 | 82899.2 |
| biopolymer transporter exbd | PviCFBP13507_24560 | Not Available | Negative | 5412679 - 5413083 | 14267.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
