Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prka family serine protein kinase | PviCFBP13507_24315 | Not Available | Positive | 5355807 - 5357729 | 73600.4 |
| yeah/yhbh family protein | PviCFBP13507_24320 | Not Available | Positive | 5357865 - 5359136 | 48772.9 |
| spovr family protein | PviCFBP13507_24325 | Not Available | Positive | 5359133 - 5360695 | 61120.3 |
| multifunctional cca addition/repair protein | PviCFBP13507_24330 | Not Available | Positive | 5360792 - 5362024 | 46040.3 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | PviCFBP13507_24335 | Not Available | Negative | 5362059 - 5362586 | 19459.7 |
| dihydroneopterin aldolase | PviCFBP13507_24340 | Not Available | Negative | 5362577 - 5362930 | 13055.6 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | PviCFBP13507_24345 | Not Available | Positive | 5362996 - 5363574 | 20630.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | PviCFBP13507_24350 | Not Available | Negative | 5363583 - 5364608 | 36507.0 |
| 30s ribosomal protein s21 | PviCFBP13507_24355 | Not Available | Positive | 5364807 - 5365022 | 8386.25 |
| dna primase | PviCFBP13507_24360 | Not Available | Positive | 5365429 - 5367384 | 72886.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
