Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone djla | PviCFBP13507_24265 | Not Available | Negative | 5345298 - 5346062 | 27961.0 |
| nucleotidyltransferase family protein | PviCFBP13507_24270 | Not Available | Negative | 5346059 - 5346733 | 24594.5 |
| aminoglycoside phosphotransferase | PviCFBP13507_24275 | Not Available | Negative | 5346775 - 5347800 | 38787.5 |
| lps biosynthesis protein | PviCFBP13507_24280 | Not Available | Positive | 5347930 - 5350710 | 104747.0 |
| molecular chaperone sura | PviCFBP13507_24285 | Not Available | Positive | 5350727 - 5352013 | 47308.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PviCFBP13507_24290 | Not Available | Positive | 5352010 - 5352999 | 34984.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | PviCFBP13507_24295 | Not Available | Positive | 5352996 - 5353802 | 29810.1 |
| co2+/mg2+ efflux protein apag | PviCFBP13507_24300 | Not Available | Positive | 5353919 - 5354299 | 13823.4 |
| diadenosine tetraphosphatase | PviCFBP13507_24305 | Not Available | Positive | 5354299 - 5355198 | 33633.2 |
| thiosulfate sulfurtransferase glpe | PviCFBP13507_24310 | Not Available | Positive | 5355198 - 5355521 | 11738.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
