Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_24000 | Not Available | Negative | 5297209 - 5298201 | 37659.0 |
| tyrosine--trna ligase | PviCFBP13507_24005 | Not Available | Negative | 5298800 - 5300011 | 44565.8 |
| peptidase m23 | PviCFBP13507_24015 | Not Available | Positive | 5300215 - 5301642 | 51618.2 |
| anhydro-n-acetylmuramic acid kinase | PviCFBP13507_24020 | Not Available | Positive | 5301646 - 5302740 | 39299.0 |
| iron-sulfur cluster insertion protein erpa | PviCFBP13507_24025 | Not Available | Negative | 5302816 - 5303166 | 12448.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | PviCFBP13507_24030 | Not Available | Negative | 5303302 - 5304336 | 36575.1 |
| protoporphyrinogen oxidase hemj | PviCFBP13507_24035 | Not Available | Positive | 5304470 - 5304898 | 16575.0 |
| duf805 domain-containing protein | PviCFBP13507_24040 | Not Available | Positive | 5305004 - 5305903 | 32359.0 |
| short-chain dehydrogenase | PviCFBP13507_24045 | Not Available | Positive | 5305957 - 5306733 | 28425.8 |
| histidine triad nucleotide-binding protein | PviCFBP13507_24050 | Not Available | Positive | 5306828 - 5307166 | 12729.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
