Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore-iron reductase, fe-s cluster protein | PviCFBP13507_02200 | Not Available | Positive | 538067 - 538843 | 29059.8 |
| s-adenosylmethionine--2-demethylmenaquinone methyltransferase | PviCFBP13507_02205 | Not Available | Positive | 538840 - 539490 | 22995.7 |
| response regulator | PviCFBP13507_02210 | Not Available | Negative | 539565 - 540002 | 15640.7 |
| pectate lyase | PviCFBP13507_02215 | Not Available | Negative | 540129 - 541376 | 44147.8 |
| dna-binding transcriptional regulator | PviCFBP13507_02220 | Not Available | Negative | 541676 - 542623 | 34753.8 |
| sdr family oxidoreductase | PviCFBP13507_02225 | Not Available | Negative | 542698 - 543501 | 28742.4 |
| short chain dehydrogenase | PviCFBP13507_02230 | Not Available | Negative | 543559 - 544323 | 26688.1 |
| sugar abc transporter atp-binding protein | PviCFBP13507_02235 | Not Available | Negative | 544334 - 545845 | 53890.5 |
| sugar abc transporter substrate-binding protein | PviCFBP13507_02240 | Not Available | Negative | 545900 - 546832 | 32201.7 |
| abc transporter permease | PviCFBP13507_02245 | Not Available | Negative | 546898 - 547893 | 34301.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
