Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | PviCFBP13507_23570 | Not Available | Positive | 5194670 - 5195062 | 14855.4 |
| methionine--trna ligase | PviCFBP13507_23575 | Not Available | Positive | 5195055 - 5196554 | 55785.2 |
| fad-binding oxidoreductase | PviCFBP13507_23580 | Not Available | Positive | 5196569 - 5197711 | 41008.1 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_23585 | Not Available | Positive | 5197708 - 5198685 | 35572.2 |
| l-lysine 6-monooxygenase | PviCFBP13507_23590 | Not Available | Positive | 5198739 - 5200061 | 49325.2 |
| pyridoxal-5'-phosphate-dependent protein | PviCFBP13507_23595 | Not Available | Positive | 5200067 - 5202076 | 73021.3 |
| fad-nad(p)-binding domain protein | PviCFBP13507_23600 | Not Available | Positive | 5202163 - 5203884 | 63674.0 |
| threonine transporter | PviCFBP13507_23605 | Not Available | Positive | 5203899 - 5204543 | 22874.8 |
| alcohol dehydrogenase | PviCFBP13507_23610 | Not Available | Positive | 5204561 - 5205715 | 41041.3 |
| esterase | PviCFBP13507_23615 | Not Available | Positive | 5205719 - 5206858 | 40353.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
