Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | PviCFBP13507_23515 | Not Available | Negative | 5184632 - 5185075 | 16238.8 |
| Trna-leu | Not Available | Not Available | Positive | 5186299 - 5186384 | Not Available |
| xre family transcriptional regulator | PviCFBP13507_23530 | Not Available | Positive | 5186814 - 5187209 | 14225.9 |
| dna topoisomerase ib | PviCFBP13507_23535 | Not Available | Negative | 5187228 - 5188283 | 39763.0 |
| molybdenum abc transporter atp-binding protein | PviCFBP13507_23540 | Not Available | Negative | 5188372 - 5189460 | 39907.5 |
| molybdate abc transporter permease subunit | PviCFBP13507_23545 | Not Available | Negative | 5189464 - 5190144 | 23974.9 |
| molybdate abc transporter substrate-binding protein | PviCFBP13507_23550 | Not Available | Negative | 5190145 - 5190858 | 24959.5 |
| tetr family transcriptional regulator | PviCFBP13507_23555 | Not Available | Positive | 5191135 - 5191779 | 24426.4 |
| alcohol dehydrogenase | PviCFBP13507_23560 | Not Available | Positive | 5191826 - 5192821 | 34732.0 |
| integrase | PviCFBP13507_23565 | Not Available | Positive | 5193194 - 5194159 | 36527.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
