Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase | PviCFBP13507_23410 | Not Available | Negative | 5164495 - 5166798 | 84782.7 |
| fatty acid hydroxylase family protein | PviCFBP13507_23415 | Not Available | Negative | 5166874 - 5167446 | 21610.3 |
| hypothetical protein | PviCFBP13507_23420 | Not Available | Negative | 5167624 - 5168052 | 15283.2 |
| methyl-accepting chemotaxis protein | PviCFBP13507_23425 | Not Available | Positive | 5168293 - 5169921 | 58058.9 |
| hypothetical protein | PviCFBP13507_23430 | Not Available | Negative | 5169908 - 5170087 | 6468.65 |
| sugar abc transporter substrate-binding protein | PviCFBP13507_23435 | Not Available | Positive | 5170163 - 5171167 | 35858.1 |
| sugar abc transporter | PviCFBP13507_23440 | Not Available | Positive | 5171181 - 5172737 | 56162.1 |
| abc transporter permease | PviCFBP13507_23445 | Not Available | Positive | 5172724 - 5173728 | 34196.5 |
| branched-chain amino acid abc transporter permease | PviCFBP13507_23450 | Not Available | Positive | 5173725 - 5174711 | 33743.3 |
| monooxygenase | PviCFBP13507_23455 | Not Available | Negative | 5174721 - 5175959 | 44755.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
