Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acsd protein | PviCFBP13507_02150 | Not Available | Positive | 525347 - 527155 | 68197.8 |
| diaminopimelate decarboxylase | PviCFBP13507_02155 | Not Available | Positive | 527148 - 528365 | 45117.9 |
| mfs transporter | PviCFBP13507_02160 | Not Available | Positive | 528362 - 529804 | 51259.6 |
| acsc protein | PviCFBP13507_02165 | Not Available | Positive | 529825 - 531702 | 70849.2 |
| siderophore biosynthesis protein sbng | PviCFBP13507_02170 | Not Available | Positive | 531699 - 532475 | 27813.8 |
| acsa protein | PviCFBP13507_02175 | Not Available | Positive | 532480 - 534348 | 70747.1 |
| achromobactin-binding protein | PviCFBP13507_02180 | Not Available | Positive | 534338 - 535258 | 33885.2 |
| iron-siderophore abc transporter permease | PviCFBP13507_02185 | Not Available | Positive | 535255 - 536244 | 33932.7 |
| iron abc transporter permease | PviCFBP13507_02190 | Not Available | Positive | 536237 - 537268 | 35922.3 |
| abc transporter atp-binding protein | PviCFBP13507_02195 | Not Available | Positive | 537279 - 538070 | 28947.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
