Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | PviCFBP13507_23310 | Not Available | Negative | 5143434 - 5143715 | 9916.66 |
| 3-deoxy-7-phosphoheptulonate synthase | PviCFBP13507_23315 | Not Available | Negative | 5143799 - 5144881 | 38926.5 |
| dna-binding protein | PviCFBP13507_23320 | Not Available | Negative | 5145569 - 5145799 | 8106.69 |
| helix-turn-helix domain-containing protein | PviCFBP13507_23325 | Not Available | Positive | 5145882 - 5146241 | 12867.2 |
| two-component system response regulator uvry | PviCFBP13507_23330 | Not Available | Positive | 5146460 - 5147128 | 24231.9 |
| excinuclease abc subunit uvrc | PviCFBP13507_23335 | Not Available | Positive | 5147131 - 5148954 | 67164.5 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | PviCFBP13507_23340 | Not Available | Positive | 5148987 - 5149547 | 20576.9 |
| Trna-gly | Not Available | Not Available | Positive | 5149614 - 5149689 | Not Available |
| gamma-glutamyltransferase | PviCFBP13507_23350 | Not Available | Negative | 5149906 - 5151501 | 56593.5 |
| diguanylate cyclase | PviCFBP13507_23355 | Not Available | Negative | 5151531 - 5152403 | 30517.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
