Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-glucose phosphate-specific phosphoglucomutase | PviCFBP13507_23260 | Not Available | Positive | 5130596 - 5132242 | 59203.8 |
| peptidylprolyl isomerase | PviCFBP13507_23265 | Not Available | Negative | 5132297 - 5132572 | 10128.4 |
| type iv pili twitching motility protein pilt | PviCFBP13507_23270 | Not Available | Positive | 5132684 - 5133850 | 42811.8 |
| 3-hydroxybutyrate dehydrogenase | PviCFBP13507_23275 | Not Available | Negative | 5133863 - 5134621 | 26466.7 |
| gntp family permease | PviCFBP13507_23280 | Not Available | Negative | 5134632 - 5136023 | 48671.8 |
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13507_23285 | Not Available | Negative | 5136275 - 5137687 | 51458.0 |
| microcin abc transporter atp-binding protein | PviCFBP13507_23290 | Not Available | Negative | 5137745 - 5139328 | 58094.8 |
| abc transporter permease | PviCFBP13507_23295 | Not Available | Negative | 5139330 - 5140355 | 38075.6 |
| microcin c abc transporter permease yejb | PviCFBP13507_23300 | Not Available | Negative | 5140352 - 5141416 | 38826.1 |
| abc transporter substrate-binding protein | PviCFBP13507_23305 | Not Available | Negative | 5141417 - 5143279 | 70176.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
