Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PviCFBP13507_23205 | Not Available | Negative | 5114953 - 5116287 | 47749.6 |
| tripartite tricarboxylate transporter substrate binding protein | PviCFBP13507_23210 | Not Available | Positive | 5117065 - 5118039 | 34565.9 |
| tripartite tricarboxylate transporter tctb family protein | PviCFBP13507_23215 | Not Available | Positive | 5118104 - 5118595 | 17545.2 |
| tat pathway signal protein | PviCFBP13507_23220 | Not Available | Positive | 5118607 - 5120127 | 52982.1 |
| enolase | PviCFBP13507_23225 | Not Available | Positive | 5120165 - 5121325 | 42708.2 |
| lysr family transcriptional regulator | PviCFBP13507_23235 | Not Available | Negative | 5122107 - 5123021 | 33542.5 |
| alcohol dehydrogenase | PviCFBP13507_23240 | Not Available | Positive | 5123340 - 5124362 | 36941.3 |
| hypothetical protein | PviCFBP13507_23245 | Not Available | Positive | 5125055 - 5126557 | 55354.2 |
| gntr family transcriptional regulator | PviCFBP13507_23250 | Not Available | Positive | 5126652 - 5128067 | 53048.9 |
| atp-dependent dna helicase | PviCFBP13507_23255 | Not Available | Positive | 5128212 - 5130488 | 84848.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
