Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pasa protein | PviCFBP13507_23150 | Not Available | Negative | 5100286 - 5100807 | 19390.3 |
| type i dna topoisomerase | PviCFBP13507_23155 | Not Available | Negative | 5100902 - 5103514 | 97154.8 |
| duf1653 domain-containing protein | PviCFBP13507_23160 | Not Available | Negative | 5103628 - 5103864 | 9006.63 |
| acetyl-coa c-acyltransferase fada | PviCFBP13507_23165 | Not Available | Negative | 5103987 - 5105162 | 41629.6 |
| fatty acid oxidation complex subunit alpha fadb | PviCFBP13507_23170 | Not Available | Negative | 5105185 - 5107332 | 77097.7 |
| hypothetical protein | PviCFBP13507_23180 | Not Available | Negative | 5107923 - 5108360 | 16885.6 |
| universal stress protein | PviCFBP13507_23185 | Not Available | Positive | 5108486 - 5108926 | 16013.4 |
| abc transporter atp-binding protein | PviCFBP13507_23190 | Not Available | Negative | 5108989 - 5110899 | 70294.5 |
| lytic murein transglycosylase | PviCFBP13507_23195 | Not Available | Positive | 5111103 - 5113031 | 73807.9 |
| hydroxyacid dehydrogenase | PviCFBP13507_23200 | Not Available | Negative | 5113489 - 5114907 | 50145.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
