Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k+/h+ antiporter subunit f | PviCFBP13507_23000 | Not Available | Positive | 5069849 - 5070127 | 10166.0 |
| na+/h+ antiporter subunit g | PviCFBP13507_23005 | Not Available | Positive | 5070124 - 5070504 | 13393.6 |
| hypothetical protein | PviCFBP13507_23010 | Not Available | Negative | 5070523 - 5070990 | 17181.6 |
| duf2789 domain-containing protein | PviCFBP13507_23015 | Not Available | Positive | 5071425 - 5071661 | 8834.37 |
| duf2235 domain-containing protein | PviCFBP13507_23020 | Not Available | Negative | 5071707 - 5073191 | 54280.6 |
| chemotaxis protein | PviCFBP13507_23025 | Not Available | Negative | 5073468 - 5075045 | 57364.0 |
| conjugal transfer protein trar | PviCFBP13507_23030 | Not Available | Negative | 5075227 - 5075631 | 15531.4 |
| abc transporter permease | PviCFBP13507_23035 | Not Available | Negative | 5075934 - 5076959 | 35568.6 |
| d-xylose abc transporter atp-binding protein | PviCFBP13507_23040 | Not Available | Negative | 5077020 - 5078597 | 57209.8 |
| rhizopine-binding protein | PviCFBP13507_23045 | Not Available | Negative | 5078660 - 5079589 | 32940.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
