Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ku protein | PviCFBP13507_22950 | Not Available | Negative | 5057726 - 5058631 | 33558.2 |
| alkanesulfonate monooxygenase, fmnh(2)-dependent | PviCFBP13507_22955 | Not Available | Positive | 5058904 - 5060043 | 41499.4 |
| fis family transcriptional regulator | PviCFBP13507_22960 | Not Available | Positive | 5060043 - 5061149 | 41370.8 |
| pyridine nucleotide-disulfide oxidoreductase | PviCFBP13507_22965 | Not Available | Negative | 5061215 - 5062621 | 51280.2 |
| xre family transcriptional regulator | PviCFBP13507_22970 | Not Available | Negative | 5062668 - 5063237 | 21050.8 |
| eama/rhat family transporter | PviCFBP13507_22975 | Not Available | Positive | 5063343 - 5064266 | 32416.1 |
| monovalent cation/h+ antiporter subunit a | PviCFBP13507_22980 | Not Available | Positive | 5064423 - 5067341 | 105703.0 |
| na+/h+ antiporter subunit c | PviCFBP13507_22985 | Not Available | Positive | 5067341 - 5067685 | 12290.5 |
| monovalent cation/h+ antiporter subunit d | PviCFBP13507_22990 | Not Available | Positive | 5067682 - 5069367 | 59863.5 |
| na+/h+ antiporter subunit e | PviCFBP13507_22995 | Not Available | Positive | 5069364 - 5069852 | 18295.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
