Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | PviCFBP13507_22850 | Not Available | Positive | 5034312 - 5035427 | 41523.4 |
| glycosyl transferase | PviCFBP13507_22855 | Not Available | Positive | 5035501 - 5036721 | 44882.1 |
| undecaprenyl-phosphate glucose phosphotransferase | PviCFBP13507_22860 | Not Available | Positive | 5036734 - 5038143 | 53488.6 |
| capsular biosynthesis protein | PviCFBP13507_22865 | Not Available | Positive | 5038307 - 5039395 | 39072.6 |
| nadph-dependent fmn reductase | PviCFBP13507_22870 | Not Available | Positive | 5039764 - 5040345 | 20825.2 |
| lyse family translocator | PviCFBP13507_22875 | Not Available | Negative | 5040569 - 5041177 | 21761.1 |
| hypothetical protein | PviCFBP13507_22880 | Not Available | Negative | 5041312 - 5041593 | 10410.3 |
| lysr family transcriptional regulator | PviCFBP13507_22885 | Not Available | Negative | 5041692 - 5042585 | 32864.0 |
| coa transferase subunit a | PviCFBP13507_22890 | Not Available | Positive | 5042712 - 5043413 | 25295.6 |
| coa transferase subunit b | PviCFBP13507_22895 | Not Available | Positive | 5043473 - 5044129 | 23150.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
