Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | PviCFBP13507_02100 | Not Available | Negative | 486444 - 487211 | 27437.9 |
| non-ribosomal peptide synthetase | PviCFBP13507_02105 | Not Available | Positive | 487551 - 497057 | 348738.0 |
| non-ribosomal peptide synthetase | PviCFBP13507_02110 | Not Available | Positive | 497054 - 514795 | 645560.0 |
| macrolide transporter subunit maca | PviCFBP13507_02115 | Not Available | Positive | 514914 - 516065 | 41504.7 |
| macrolide abc transporter permease/atp-binding protein macb | PviCFBP13507_02120 | Not Available | Positive | 516067 - 518076 | 72753.7 |
| luxr family transcriptional regulator | PviCFBP13507_02125 | Not Available | Negative | 518051 - 518761 | 26321.5 |
| rna polymerase subunit sigma | PviCFBP13507_02130 | Not Available | Positive | 519463 - 519972 | 19677.3 |
| fecr family protein | PviCFBP13507_02135 | Not Available | Positive | 519969 - 520934 | 35617.7 |
| tonb-dependent siderophore receptor | PviCFBP13507_02140 | Not Available | Positive | 521006 - 523408 | 86743.1 |
| diaminobutyrate--2-oxoglutarate transaminase | PviCFBP13507_02145 | Not Available | Positive | 523752 - 525134 | 49683.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
