Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs family aminotransferase | PviCFBP13507_22800 | Not Available | Positive | 5022853 - 5023974 | 41768.8 |
| polysaccharide biosynthesis protein | PviCFBP13507_22805 | Not Available | Positive | 5023980 - 5025494 | 55663.9 |
| glycosyl transferase family 2 | PviCFBP13507_22810 | Not Available | Positive | 5025498 - 5026439 | 35577.5 |
| phosphotyrosine protein phosphatase | PviCFBP13507_22815 | Not Available | Positive | 5026429 - 5026881 | 17031.8 |
| tyrosine-protein kinase | PviCFBP13507_22820 | Not Available | Positive | 5026882 - 5029098 | 81852.5 |
| hypothetical protein | PviCFBP13507_22825 | Not Available | Positive | 5029143 - 5029931 | 29994.4 |
| transcription/translation regulatory transformer protein rfah | PviCFBP13507_22830 | Not Available | Positive | 5029937 - 5030449 | 19698.9 |
| glycosyl transferase family 2 | PviCFBP13507_22835 | Not Available | Positive | 5030580 - 5031581 | 37634.0 |
| glycosyl transferase family 1 | PviCFBP13507_22840 | Not Available | Positive | 5031578 - 5032828 | 46320.9 |
| hypothetical protein | PviCFBP13507_22845 | Not Available | Positive | 5032953 - 5034293 | 50989.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
