Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | PviCFBP13507_22745 | Not Available | Positive | 5009737 - 5011056 | 50007.5 |
| integrase | PviCFBP13507_22755 | Not Available | Positive | 5011984 - 5012964 | 36232.4 |
| hypothetical protein | PviCFBP13507_22760 | Not Available | Positive | 5012961 - 5013176 | 8567.32 |
| nucleoid-associated protein | PviCFBP13507_22765 | Not Available | Positive | 5013455 - 5014615 | 42392.7 |
| hypothetical protein | PviCFBP13507_22770 | Not Available | Positive | 5014608 - 5015735 | 42588.4 |
| threonine/homoserine exporter rhta | PviCFBP13507_22775 | Not Available | Positive | 5016598 - 5017485 | 30460.4 |
| hypothetical protein | PviCFBP13507_22780 | Not Available | Positive | 5017658 - 5017972 | 11040.3 |
| aminopeptidase p family protein | PviCFBP13507_22785 | Not Available | Negative | 5017997 - 5019805 | 65993.8 |
| aminotransferase class v-fold plp-dependent enzyme | PviCFBP13507_22790 | Not Available | Negative | 5019863 - 5021041 | 40827.8 |
| hypothetical protein | PviCFBP13507_22795 | Not Available | Positive | 5022007 - 5022807 | 30293.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
