Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | PviCFBP13507_22640 | Not Available | Positive | 4991277 - 4991681 | 14637.9 |
| asma family protein | PviCFBP13507_22645 | Not Available | Positive | 4991785 - 4994007 | 80283.4 |
| adenine dna glycosylase | PviCFBP13507_22650 | Not Available | Positive | 4994205 - 4995272 | 39848.9 |
| oxidative damage protection protein | PviCFBP13507_22655 | Not Available | Positive | 4995269 - 4995541 | 10639.7 |
| Trna-phe | Not Available | Not Available | Positive | 4995643 - 4995718 | Not Available |
| type ii toxin-antitoxin system rele/pare family toxin | PviCFBP13507_22665 | Not Available | Negative | 4995848 - 4996138 | 11276.3 |
| type ii toxin-antitoxin system pard family antitoxin | PviCFBP13507_22670 | Not Available | Negative | 4996131 - 4996376 | 9428.0 |
| hypothetical protein | PviCFBP13507_22675 | Not Available | Positive | 4996559 - 4996840 | 9780.3 |
| methyl-accepting chemotaxis protein | PviCFBP13507_22680 | Not Available | Positive | 4997105 - 4998451 | 48898.1 |
| hypothetical protein | PviCFBP13507_22685 | Not Available | Positive | 4998620 - 4999105 | 18273.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
