Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | PviCFBP13507_22540 | Not Available | Negative | 4971218 - 4971856 | 24010.4 |
| outer membrane porin, oprd family | PviCFBP13507_22545 | Not Available | Negative | 4972026 - 4973372 | 48696.0 |
| hypothetical protein | PviCFBP13507_22550 | Not Available | Negative | 4974433 - 4974873 | 16541.8 |
| trna (cytidine(34)-2'-o)-methyltransferase | PviCFBP13507_22555 | Not Available | Positive | 4974872 - 4975327 | 16860.2 |
| protein-export chaperone secb | PviCFBP13507_22560 | Not Available | Negative | 4975484 - 4975975 | 18096.4 |
| glutaredoxin 3 | PviCFBP13507_22565 | Not Available | Negative | 4976014 - 4976265 | 9073.05 |
| rhodanese-like domain-containing protein | PviCFBP13507_22570 | Not Available | Negative | 4976268 - 4976681 | 14781.0 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | PviCFBP13507_22575 | Not Available | Positive | 4976827 - 4978359 | 55618.3 |
| peptidase m23 | PviCFBP13507_22580 | Not Available | Positive | 4978513 - 4979823 | 48556.7 |
| peptidase s41 | PviCFBP13507_22585 | Not Available | Positive | 4979857 - 4981188 | 46566.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
