Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-haloalkanoic acid dehalogenase | PviCFBP13507_22490 | Not Available | Negative | 4960554 - 4961210 | 24276.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | PviCFBP13507_22495 | Not Available | Negative | 4961290 - 4962594 | 46790.7 |
| glyoxylate/hydroxypyruvate reductase a | PviCFBP13507_22500 | Not Available | Positive | 4962877 - 4963806 | 34498.6 |
| tetr/acrr family transcriptional regulator | PviCFBP13507_22505 | Not Available | Positive | 4963883 - 4964515 | 23384.2 |
| rhs repeat-associated core domain-containing protein | PviCFBP13507_22510 | Not Available | Negative | 4964522 - 4965628 | 39661.6 |
| hypothetical protein | PviCFBP13507_22515 | Not Available | Positive | 4965861 - 4967198 | 46716.5 |
| transporter | PviCFBP13507_22520 | Not Available | Negative | 4967317 - 4967532 | 7628.36 |
| aliphatic sulfonates abc transporter atp-binding protein | PviCFBP13507_22525 | Not Available | Negative | 4967559 - 4968371 | 29278.9 |
| aliphatic sulfonate abc transporter permease ssuc | PviCFBP13507_22530 | Not Available | Negative | 4968368 - 4969165 | 28594.6 |
| sulfonate abc transporter substrate-binding protein | PviCFBP13507_22535 | Not Available | Negative | 4969194 - 4970159 | 34590.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
