Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2292 domain-containing protein | PviCFBP13507_22385 | Not Available | Negative | 4939445 - 4939627 | 6719.01 |
| ggdef domain-containing protein | PviCFBP13507_22390 | Not Available | Negative | 4939829 - 4941760 | 70829.1 |
| acyl-coa desaturase | PviCFBP13507_22395 | Not Available | Positive | 4941918 - 4943102 | 45242.9 |
| ggdef domain-containing protein | PviCFBP13507_22400 | Not Available | Positive | 4943238 - 4944224 | 37020.7 |
| hypothetical protein | PviCFBP13507_22405 | Not Available | Positive | 4944245 - 4944454 | 7579.51 |
| thymidylate synthase | PviCFBP13507_22410 | Not Available | Negative | 4944451 - 4945422 | 36705.9 |
| prolipoprotein diacylglyceryl transferase | PviCFBP13507_22415 | Not Available | Negative | 4945475 - 4946287 | 30059.4 |
| hypothetical protein | PviCFBP13507_22420 | Not Available | Positive | 4946414 - 4947160 | 26617.6 |
| phosphoenolpyruvate-protein phosphotransferase ptsp | PviCFBP13507_22430 | Not Available | Negative | 4947563 - 4949842 | 83189.9 |
| rna pyrophosphohydrolase | PviCFBP13507_22435 | Not Available | Negative | 4949864 - 4950343 | 18872.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
