Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13507_22335 | Not Available | Negative | 4928869 - 4929819 | 34563.3 |
| alpha/beta hydrolase | PviCFBP13507_22340 | Not Available | Negative | 4929901 - 4930482 | 21902.9 |
| mfs transporter | PviCFBP13507_22345 | Not Available | Negative | 4930696 - 4932006 | 47378.5 |
| arac family transcriptional regulator | PviCFBP13507_22350 | Not Available | Positive | 4932576 - 4933568 | 37008.6 |
| cyclic nucleotide-binding domain-containing protein | PviCFBP13507_22355 | Not Available | Negative | 4934033 - 4934737 | 26637.6 |
| duf962 domain-containing protein | PviCFBP13507_22360 | Not Available | Positive | 4934822 - 4935346 | 18986.8 |
| sulfate abc transporter atp-binding protein | PviCFBP13507_22365 | Not Available | Negative | 4935512 - 4936492 | 36754.0 |
| sulfate abc transporter permease subunit cysw | PviCFBP13507_22370 | Not Available | Negative | 4936495 - 4937367 | 31500.0 |
| sulfate abc transporter permease subunit cyst | PviCFBP13507_22375 | Not Available | Negative | 4937378 - 4938199 | 29681.4 |
| sulfate abc transporter substrate-binding protein | PviCFBP13507_22380 | Not Available | Negative | 4938305 - 4939315 | 36844.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
