Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_22180 | Not Available | Positive | 4894355 - 4895269 | 33599.8 |
| c4-dicarboxylate abc transporter | PviCFBP13507_22185 | Not Available | Negative | 4895266 - 4896426 | 41499.7 |
| lysr family transcriptional regulator | PviCFBP13507_22190 | Not Available | Positive | 4896553 - 4897449 | 32638.6 |
| hypothetical protein | PviCFBP13507_22195 | Not Available | Negative | 4897681 - 4899102 | 49626.4 |
| acyltransferase | PviCFBP13507_22200 | Not Available | Negative | 4899117 - 4899938 | 30597.2 |
| hypothetical protein | PviCFBP13507_22205 | Not Available | Negative | 4899935 - 4901350 | 51277.0 |
| glycosyltransferase family 1 protein | PviCFBP13507_22210 | Not Available | Negative | 4901350 - 4902450 | 41125.3 |
| glycosyl transferase | PviCFBP13507_22215 | Not Available | Negative | 4902434 - 4903657 | 46133.2 |
| beta-xylosidase | PviCFBP13507_22220 | Not Available | Negative | 4903660 - 4904973 | 48219.5 |
| glycosyl transferase family 1 | PviCFBP13507_22225 | Not Available | Negative | 4904975 - 4906153 | 43155.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
